C.tropicalis - PathoYeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

CTRG_04446

Promoter Sequence

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -1000 -999 -998 -997 -996 -995 -994 -993 -992 -991 -990 -989 -988 -987 -986 -985 -984 -983 -982 -981 -980 -979 -978 -977 -976 -975 -974 -973 -972 -971 -970 -969 -968 -967 -966 -965 -964 -963 -962 -961 -960 -959 -958 -957 -956 -955 -954 -953 -952 -951 -950 -949 -948 -947 -946 -945 -944 -943 -942 -941 -940 -939 -938 -937 -936 -935 -934 -933 -932 -931 -930 -929 -928 -927 -926 -925 -924 -923 -922 -921 -920 -919 -918 -917 -916 -915 -914 -913 -912 -911 -910 -909 -908 -907 -906 -905 -904 -903 -902 -901 -900 -899 -898 -897 -896 -895 -894 -893 -892 -891 -890 -889 -888 -887 -886 -885 -884 -883 -882 -881 -880 -879 -878 -877 -876 -875 -874 -873 -872 -871 -870 -869 -868 -867 -866 -865 -864 -863 -862 -861 -860 -859 -858 -857 -856 -855 -854 -853 -852 -851 -850 -849 -848 -847 -846 -845 -844 -843 -842 -841 -840 -839 -838 -837 -836 -835 -834 -833 -832 -831 -830 -829 -828 -827 -826 -825 -824 -823 -822 -821 -820 -819 -818 -817 -816 -815 -814 -813 -812 -811 -810 -809 -808 -807 -806 -805 -804 -803 -802 -801 -800 -799 -798 -797 -796 -795 -794 -793 -792 -791 -790 -789 -788 -787 -786 -785 -784 -783 -782 -781 -780 -779 -778 -777 -776 -775 -774 -773 -772 -771 -770 -769 -768 -767 -766

>CTRG_04446    upstream sequence, from -1000 to -1, size 1000
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNNNNAATAGTTTTGTCTCCCCCTCCCTTTGTTTTAAGCAAG
GGAAAAATTAATAAATAATAAATTACCCCATATATTCTTTACAGAACAAAAGCGCACAGA
GGGTGTGTGTGTGTGTGTGTGTCACTCATCTTTTCTGTCTCTACATGAATCAACTGATAA
GAAAGAAAATAAAAGACCAAAAAACGAAAGCAAAAAAAAAAAAAATCTTAAATATCTCAC
AGACAGCCACCAAATAATACAAAAACAGCCCATAATTAAAATAGATTTAATTTCATTGGT
GAATTTTACATCAAAATAGTATTGTACTGTACCAATTGTATCACGAGATATTGATCACTT
GGACATCCAGCACAGCAAATTAAATAGCAAACTTGTAAACTAGAGAGCAAAAAAGAAAAT
TCTTACTTGTTGTTGTATGGAATTTCTAAGATTGCTACTTGAATCACAAAAACTGTTAAG
CTCTCAATTGTCTTCCAATATATATTTTTGTTTTTTGTGTGTGTCTGTGCGCTCTTTTGT
TTAATAAATGAAATCCCCCTTGCAAAACCCACCCCATTTTCTCTTGCTCTCTGTCTCCAT
TCAGAAAGAATTTTTTTTTTTTTTTGGTTACACTTTTCTTTCCTATAAATTTTGTCCTTA
TTCTTATCTATTTATCATAGGTTTGATTGTATAATTAATTATTTATTTATTTATTATTTG
TTAGTATTACTGTTTTAAGTCAATTCGTATCTATTCCATC

Promoter Sequence
Complementary Strand

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -735 -736 -737 -738 -739 -740 -741 -742 -743 -744 -745 -746 -747 -748 -749 -750 -751 -752 -753 -754 -755 -756 -757 -758 -759 -760 -761 -762 -763 -764 -765 -766 -767 -768 -769 -770 -771 -772 -773 -774 -775 -776 -777 -778 -779 -780 -781 -782 -783 -784 -785 -786 -787 -788 -789 -790 -791 -792 -793 -794 -795 -796 -797 -798 -799 -800 -801 -802 -803 -804 -805 -806 -807 -808 -809 -810 -811 -812 -813 -814 -815 -816 -817 -818 -819 -820 -821 -822 -823 -824 -825 -826 -827 -828 -829 -830 -831 -832 -833 -834 -835 -836 -837 -838 -839 -840 -841 -842 -843 -844 -845 -846 -847 -848 -849 -850 -851 -852 -853 -854 -855 -856 -857 -858 -859 -860 -861 -862 -863 -864 -865 -866 -867 -868 -869 -870 -871 -872 -873 -874 -875 -876 -877 -878 -879 -880 -881 -882 -883 -884 -885 -886 -887 -888 -889 -890 -891 -892 -893 -894 -895 -896 -897 -898 -899 -900 -901 -902 -903 -904 -905 -906 -907 -908 -909 -910 -911 -912 -913 -914 -915 -916 -917 -918 -919 -920 -921 -922 -923 -924 -925 -926 -927 -928 -929 -930 -931 -932 -933 -934 -935 -936 -937 -938 -939 -940 -941 -942 -943 -944 -945 -946 -947 -948 -949 -950 -951 -952 -953 -954 -955 -956 -957 -958 -959 -960 -961 -962 -963 -964 -965 -966 -967 -968 -969 -970 -971

>CTRG_04446	Upstream Sequence Complementary Strand
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNNTTATCAAAACAGAGGGGGAGGGAAACAAAATTCGTTC
CCTTTTTAATTATTTATTATTTAATGGGGTATATAAGAAATGTCTTGTTTTCGCGTGTCT
CCCACACACACACACACACACAGTGAGTAGAAAAGACAGAGATGTACTTAGTTGACTATT
CTTTCTTTTATTTTCTGGTTTTTTGCTTTCGTTTTTTTTTTTTTTAGAATTTATAGAGTG
TCTGTCGGTGGTTTATTATGTTTTTGTCGGGTATTAATTTTATCTAAATTAAAGTAACCA
CTTAAAATGTAGTTTTATCATAACATGACATGGTTAACATAGTGCTCTATAACTAGTGAA
CCTGTAGGTCGTGTCGTTTAATTTATCGTTTGAACATTTGATCTCTCGTTTTTTCTTTTA
AGAATGAACAACAACATACCTTAAAGATTCTAACGATGAACTTAGTGTTTTTGACAATTC
GAGAGTTAACAGAAGGTTATATATAAAAACAAAAAACACACACAGACACGCGAGAAAACA
AATTATTTACTTTAGGGGGAACGTTTTGGGTGGGGTAAAAGAGAACGAGAGACAGAGGTA
AGTCTTTCTTAAAAAAAAAAAAAAACCAATGTGAAAAGAAAGGATATTTAAAACAGGAAT
AAGAATAGATAAATAGTATCCAAACTAACATATTAATTAATAAATAAATAAATAATAAAC
AATCATAATGACAAAATTCAGTTAAGCATAGATAAGGTAG