C.tropicalis - PathoYeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

CTRG_04682

Promoter Sequence

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -485 -484 -483 -482 -481 -480 -479 -478 -477 -476 -475 -474 -473 -472 -471 -470 -469 -468 -467 -466 -465 -464 -463 -462 -461 -460 -459 -458 -457 -456 -455 -454 -453 -452 -451 -450 -449 -448 -447 -446 -445 -444 -443 -442 -441 -440 -439 -438 -437 -436 -435 -434 -433 -432 -431 -430 -429 -428 -427 -426 -425 -424 -423 -422 -421 -420 -419 -418 -417 -416 -415 -414 -413 -412 -411 -410 -409 -408 -407 -406 -405 -404 -403 -402 -401 -400 -399 -398 -397 -396 -395 -394 -393 -392 -391 -390 -389 -388

>CTRG_04682    upstream sequence, from -1000 to -1, size 1000
CAACTTTATGATAGAATTAGTCAAGAATATGACAACAATGTTTCTAAAGTCAACTACACT
TCGCTAACTGAAGTTGCTCATAACATCAAGAAAGCCAAAAACTTGGAAGATCTTCCAGGA
TTGTTTAGATTGTCATATCAACATGCAAATGATAATCAACAATTGAATACTACCGTTGAA
GGGTCTGTTCGTGATTTGGCTATTTTCACAGACGGTTCCAAATTCACTATATTCTATAAT
GCTTTATTATACTCCCATCAAAGAATTGTGATATTTGGTGAGCAATTCAATCAATACTTG
TCCAAAGTCCAAAAAGATACCAATATTGGCATCACTAAAGTTAATTTGATCACTGATTCA
CAGAGACTGCAATTACCTGATCCAACAATAGATTTGGACTGGTCTGGATATAGAGGTGCA
ATCCAAGACATTTTCATGGATAATGCCAACAAACACCCTGATAGAACATGTGTTGTTGAA
ACTGAATCATTTATGGATTCAAGTTCCAAAACAAGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNN>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>NNNNAGCCTATCCACCAGCTAGA
CAGAATATTTACCTTTCTGTTGCTCAAACCAAGAGGATTGATTGGTTTGGAAAAAGCTGG
TACTTTGGATCAATTGGTAGTTGACTACATTAATAACGAATTGGATGTGATTACTACAAT
CCCACAATTGAAAATTGAAGACGATGGTAAATTAGTTGGTGGTAATCTTGAGAATAAATC
AGAAGACTGTTTAGCCAGCTACGAAAGTTTCAAAGATCAACCAACCGGGGTTATAGTTGG
ACCTGATTCTAATCCTACTTTATCTTTCACCTCTGGTTCTGAGGGTATTCCAAAAGGTGT
TTTAGGTCGTCATTACTCATTAGCTTACTATTTTCCATGG

Promoter Sequence
Complementary Strand

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -358 -359 -360 -361 -362 -363 -364 -365 -366 -367 -368 -369 -370 -371 -372 -373 -374 -375 -376 -377 -378 -379 -380 -381 -382 -383 -384 -385 -386 -387 -388 -389 -390 -391 -392 -393 -394 -395 -396 -397 -398 -399 -400 -401 -402 -403 -404 -405 -406 -407 -408 -409 -410 -411 -412 -413 -414 -415 -416 -417 -418 -419 -420 -421 -422 -423 -424 -425 -426 -427 -428 -429 -430 -431 -432 -433 -434 -435 -436 -437 -438 -439 -440 -441 -442 -443 -444 -445 -446 -447 -448 -449 -450 -451 -452 -453 -454 -455 -456

>CTRG_04682	Upstream Sequence Complementary Strand
GTTGAAATACTATCTTAATCAGTTCTTATACTGTTGTTACAAAGATTTCAGTTGATGTGA
AGCGATTGACTTCAACGAGTATTGTAGTTCTTTCGGTTTTTGAACCTTCTAGAAGGTCCT
AACAAATCTAACAGTATAGTTGTACGTTTACTATTAGTTGTTAACTTATGATGGCAACTT
CCCAGACAAGCACTAAACCGATAAAAGTGTCTGCCAAGGTTTAAGTGATATAAGATATTA
CGAAATAATATGAGGGTAGTTTCTTAACACTATAAACCACTCGTTAAGTTAGTTATGAAC
AGGTTTCAGGTTTTTCTATGGTTATAACCGTAGTGATTTCAATTAAACTAGTGACTAAGT
GTCTCTGACGTTAATGGACTAGGTTGTTATCTAAACCTGACCAGACCTATATCTCCACGT
TAGGTTCTGTAAAAGTACCTATTACGGTTGTTTGTGGGACTATCTTGTACACAACAACTT
TGACTTAGTAAATACCTAAGTTCAAGGTTTTGTTCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNN>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>NNNTCGGATAGGTGGTCGATCT
GTCTTATAAATGGAAAGACAACGAGTTTGGTTCTCCTAACTAACCAAACCTTTTTCGACC
ATGAAACCTAGTTAACCATCAACTGATGTAATTATTGCTTAACCTACACTAATGATGTTA
GGGTGTTAACTTTTAACTTCTGCTACCATTTAATCAACCACCATTAGAACTCTTATTTAG
TCTTCTGACAAATCGGTCGATGCTTTCAAAGTTTCTAGTTGGTTGGCCCCAATATCAACC
TGGACTAAGATTAGGATGAAATAGAAAGTGGAGACCAAGACTCCCATAAGGTTTTCCACA
AAATCCAGCAGTAATGAGTAATCGAATGATAAAAGGTACC