C.tropicalis - PathoYeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

CTRG_06229

Promoter Sequence

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -273 -272 -271 -270 -269 -268 -267 -266 -265 -264 -263 -262 -261 -260 -259 -258 -257 -256 -255 -254 -253 -252 -251 -250 -249 -248 -247 -246 -245 -244 -243 -242 -241 -240 -239 -238 -237 -236 -235 -234 -233 -232 -231 -230 -229 -228 -227 -226 -225 -224 -223 -222 -221 -220 -219 -218 -217 -216 -215 -214 -213 -212 -211 -210 -209 -208 -207 -206 -205 -204 -203 -202 -201 -200 -199 -198 -197 -196 -195 -194 -193 -192 -191 -190 -189 -188 -187 -186 -185 -184 -183 -182 -181 -180 -179 -178 -177 -176 -175 -174 -173 -172 -171 -170 -169 -168 -167 -166 -165 -164 -163 -162 -161 -160 -159 -158 -157 -156 -155 -154 -153 -152 -151 -150 -149 -148 -147 -146 -145 -144 -143 -142 -141 -140 -139 -138 -137 -136 -135 -134 -133 -132 -131 -130 -129 -128 -127 -126 -125 -124 -123 -122 -121 -120 -119 -118 -117 -116 -115 -114 -113 -112 -111 -110 -109 -108 -107 -106 -105 -104 -103 -102 -101 -100 -99 -98 -97 -96 -95 -94 -93 -92 -91 -90 -89 -88 -87 -86 -85 -84 -83 -82 -81 -80 -79 -78 -77 -76 -75 -74 -73 -72 -71 -70 -69 -68 -67 -66 -65 -64 -63 -62 -61 -60 -59 -58 -57 -56 -55 -54 -53 -52 -51 -50 -49 -48 -47 -46 -45

>CTRG_06229    upstream sequence, from -1000 to -1, size 1000
TGAACATAACTATATGGAGGAGTTGTTCGGAACACAACATATTGCTACTGCGATGACCAA
TAGAACCACTGCTGACGAAGAACGTGGGCAAAAGGAGATTCCTAATATGAAGACACAAGA
AGAAAGTTCCAGTTCTGATACATCTCAAGAAGGATACGCTGAGAAACCACCATCACCACC
TCAACCACCGTCGACTCCACCGCTGGCAGATCAACCACCGGTACGTCCACAAATATCCAG
ACGAAGAAGTTCTATTGCTAGCACTGTCGAGAAAGTGCAAAAGTATCGTTGGTGGGATGA
GGAATTCAAACAGGAAAGACTTAAAATCATAACCAGATTTTTAATCAATTATGTTTTCTT
GGTTGTTGGATTTACCGGTGTGTTGTCTATATATACCGGTTCTTACTATCAAAGAGATTT
GAGATATAAGGATTTGAAAATGGCGGTGATTATTGCAGACCAACCAGTTGGTGATTTGCC
CAATATAGTAGGTCAAACAGTGGAATATTATTTCACAGAAGTACCAGCGGTTCAACCATT
TGGAGATTTTGAAGTATGGAATTATACAAGAATATCAGAACTTGCAGAATCTAAAAATCA
TACAATACGACAAGAAATTCACGAACAGATTCATCATCAGAAATTTTGGGCTATATTCTA
TGTTCATGAAAATGCCACATTAGACTGGTATCAAGCATTAGTCACACAGGATCAAGAGTT
ACCCCAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNNTTCTGCTTAGAGATCAAT

Promoter Sequence
Complementary Strand

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -18 -19 -20 -21 -22 -23 -24 -25 -26 -27 -28 -29 -30 -31 -32 -33 -34 -35 -36 -37 -38 -39 -40 -41 -42 -43 -44 -45 -46 -47 -48 -49 -50 -51 -52 -53 -54 -55 -56 -57 -58 -59 -60 -61 -62 -63 -64 -65 -66 -67 -68 -69 -70 -71 -72 -73 -74 -75 -76 -77 -78 -79 -80 -81 -82 -83 -84 -85 -86 -87 -88 -89 -90 -91 -92 -93 -94 -95 -96 -97 -98 -99 -100 -101 -102 -103 -104 -105 -106 -107 -108 -109 -110 -111 -112 -113 -114 -115 -116 -117 -118 -119 -120 -121 -122 -123 -124 -125 -126 -127 -128 -129 -130 -131 -132 -133 -134 -135 -136 -137 -138 -139 -140 -141 -142 -143 -144 -145 -146 -147 -148 -149 -150 -151 -152 -153 -154 -155 -156 -157 -158 -159 -160 -161 -162 -163 -164 -165 -166 -167 -168 -169 -170 -171 -172 -173 -174 -175 -176 -177 -178 -179 -180 -181 -182 -183 -184 -185 -186 -187 -188 -189 -190 -191 -192 -193 -194 -195 -196 -197 -198 -199 -200 -201 -202 -203 -204 -205 -206 -207 -208 -209 -210 -211 -212 -213 -214 -215 -216 -217 -218 -219 -220 -221 -222 -223 -224 -225 -226 -227 -228 -229 -230 -231 -232 -233 -234 -235 -236 -237 -238 -239 -240 -241 -242 -243

>CTRG_06229	Upstream Sequence Complementary Strand
ACTTGTATTGATATACCTCCTCAACAAGCCTTGTGTTGTATAACGATGACGCTACTGGTT
ATCTTGGTGACGACTGCTTCTTGCACCCGTTTTCCTCTAAGGATTATACTTCTGTGTTCT
TCTTTCAAGGTCAAGACTATGTAGAGTTCTTCCTATGCGACTCTTTGGTGGTAGTGGTGG
AGTTGGTGGCAGCTGAGGTGGCGACCGTCTAGTTGGTGGCCATGCAGGTGTTTATAGGTC
TGCTTCTTCAAGATAACGATCGTGACAGCTCTTTCACGTTTTCATAGCAACCACCCTACT
CCTTAAGTTTGTCCTTTCTGAATTTTAGTATTGGTCTAAAAATTAGTTAATACAAAAGAA
CCAACAACCTAAATGGCCACACAACAGATATATATGGCCAAGAATGATAGTTTCTCTAAA
CTCTATATTCCTAAACTTTTACCGCCACTAATAACGTCTGGTTGGTCAACCACTAAACGG
GTTATATCATCCAGTTTGTCACCTTATAATAAAGTGTCTTCATGGTCGCCAAGTTGGTAA
ACCTCTAAAACTTCATACCTTAATATGTTCTTATAGTCTTGAACGTCTTAGATTTTTAGT
ATGTTATGCTGTTCTTTAAGTGCTTGTCTAAGTAGTAGTCTTTAAAACCCGATATAAGAT
ACAAGTACTTTTACGGTGTAATCTGACCATAGTTCGTAATCAGTGTGTCCTAGTTCTCAA
TGGGGTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNNNNAAGACGAATCTCTAGTTA