PubMed
Iyer VR et al., Nature, 2001 Jan 25;409(6819):533-8Iyer VR et al., Nature, 2001 Jan 25;409(6819):533-8
Direct
Chip-on-chip
N/A
S288c
N/A
N/A
PubMed
Workman CT et al., Science (New York, N.Y.), 2006 May 19;312(5776):1054-9Workman CT et al., Science (New York, N.Y.), 2006 May 19;312(5776):1054-9
Direct
Chip-on-chip
N/A
S288c
N/A
N/A
PubMed
Chua G et al., Proceedings of the National Academy of Sciences of the United States of America, 2006 Aug 8;103(32):12045-50Chua G et al., Proceedings of the National Academy of Sciences of the United States of America, 2006 Aug 8;103(32):12045-50
Indirect
Microarray analysis - wt vs TF overexpression
Positive
N/A
Cells grown in selective medium supplemented with 2% raffinose before induction with 2% galactose for 3 h
N/A
PubMed
Hendler A et al., PLoS genetics, 2017 May;13(5):e1006778Hendler A et al., PLoS genetics, 2017 May;13(5):e1006778
Direct
ChIP
N/A
15Daub
Alpha factor arrested culturesÂ
N/A
Indirect
RNA-seq analysis - WT vs TF Deletion
Negative
15Daub
Yeast strains were grown in rich medium at 30°C to an optical density at 600 nm (OD600) of 0.5.
-0.776649143637417
Indirect
RNA-seq analysis - WT vs TF Deletion
Positive
15Daub
Yeast growth media (yeast-peptone-dextrose [YPD], yeast-peptone-acetate, and synthetic complete) were of standard composition
0.94436923385316
Indirect
RNA-seq analysis - WT vs TF Deletion
Negative
15Daub
Cells were grown in 7 ml of SC over-night at 30°C. Cells were synchronized by alpha factor arrest and release and immediately collected. Transcription factor gene deletion.
-0.776649143637417
Indirect
RNA-seq analysis - WT vs TF Deletion
Positive
15Daub
Cells were grown in 7 ml of SC over-night at 30°C. Cells were synchronized by alpha factor arrest and release and after 30 minutes they were collected. Transcription factor gene deletion.
