S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition	Log2FC
Rim101p	YDL042C	PubMed Laskar S et al., Molecular and cellular biology, 2015 Jan;35(2):437-50	Indirect	Western blot - wt vs TF mutant	Positive	S288c	Cells carrying the empty vector vs the Hsp82 overexpression plasmid (SLY77), with anti-Sir2 antibodies, SC medium	N/A
		PubMed Read T et al., PLoS genetics, 2016 Jan;12(1):e1005746	Indirect	RNA-seq analysis - WT vs TF Deletion	Positive	L6441	Cells were grown in 100 ml of CSD (Chelex-treated synthetic defined medium) containing <100 nM of zinc. Cells were inoculated from overnight cultures into CSD at an initial OD600 = 0.01 and grown to mid-log phase (OD600 ≈ 0.5) before RNA isolation.	0.465400674191727
			Indirect	RNA-seq analysis - WT vs TF Deletion	Positive	L6441	Grown to mid-log phase in standard YPD media. Transcription factor gene deletion.	0.465400674191727