S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Aft1p	YDR534C	PubMed Protchenko O et al., The Journal of biological chemistry, 2001 Dec 28;276(52):49244-50	Indirect	Northern blot - wt vs TF overexpression	Positive	S288c	Unstressed log-phase growth (control)	cells grown to mid log phase in synthetic iron-replete medium, expressing a constitutive AFT1 allele	N/A
		PubMed Dubacq C et al., Molecular genetics and genomics : MGG, 2006 Feb;275(2):114-24	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	Stress	YPD medium + 200mM hydroxyurea	N/A
		PubMed Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - WT vs TF Deletion	Negative	BY4741; S288C; R1158	Unstressed log-phase growth (control)	Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion.	-1.3920626908164
		PubMed Berthelet S et al., Genetics, 2010 Jul;185(3):1111-28	Indirect	Microarray analysis - WT vs TF Deletion	Negative	YKB779	Stress	Grown in YPD at 30°C to OD600 of 0.4 and benomyl was added to a final concentration of 20 μg/mL for 20 min. Transcription factor gene deletion.	-3.31263
			Indirect	Microarray analysis - WT vs TF Deletion	Negative	YKB779	Unstressed log-phase growth (control)	Grown in YPD at 30°C to OD600 of 0.4. Transcription factor gene deletion.	-1.792358