Yeastract
YEASTRACT+ INESC-ID IST IBB
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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Group		 Environmental
Condition		 Log2FC
Mbp1p YER070W PubMed external link Iyer VR et al., Nature, 2001 Jan 25;409(6819):533-8Iyer VR et al., Nature, 2001 Jan 25;409(6819):533-8 Direct Chip-on-chip N/A S288c N/A N/A N/A
PubMed external link Simon I et al., Cell, 2001 Sep 21;106(6):697-708Simon I et al., Cell, 2001 Sep 21;106(6):697-708 Direct Chip-on-chip N/A S288c Unstressed log-phase growth (control) YPD medium; mid-log phase N/A
PubMed external link Lee TI et al., Science (New York, N.Y.), 2002 Oct 25;298(5594):799-804Lee TI et al., Science (New York, N.Y.), 2002 Oct 25;298(5594):799-804 Direct Chip-on-chip N/A S288c Unstressed log-phase growth (control) YPD medium; mid-log phase N/A
PubMed external link Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 Direct Chip-on-chip N/A S288c Unstressed log-phase growth (control) YPD medium; mid-log phase N/A
PubMed external link Raithatha SA et al., Genetics, 2005 Mar;169(3):1329-42Raithatha SA et al., Genetics, 2005 Mar;169(3):1329-42 Indirect Northern blot - wt vs TF mutant Positive S288c Cell cycle/morphology time course during meiosis N/A
PubMed external link Bean JM et al., Genetics, 2005 Sep;171(1):49-61Bean JM et al., Genetics, 2005 Sep;171(1):49-61 Indirect Northern blot - wt vs TF mutant Positive S288c Cell cycle/morphology Expression along cell cycle N/A
PubMed external link Ashe M et al., The Journal of biological chemistry, 2008 Mar 7;283(10):6040-9Ashe M et al., The Journal of biological chemistry, 2008 Mar 7;283(10):6040-9 Direct ChIP N/A S288c Unstressed log-phase growth (control) YPD medium; mid-log phase N/A
PubMed external link Lotito L et al., European journal of pharmacology, 2009 Jan 28;603(1-3):29-36Lotito L et al., European journal of pharmacology, 2009 Jan 28;603(1-3):29-36 Indirect RT-PCR - wt vs TF mutant Negative S288c Unstressed log-phase growth (control) Control - 0.05% dimethyl sulfoxide N/A
PubMed external link Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77 Indirect Microarray analysis - WT vs TF Deletion Negative BY4741; S288C; R1158 Unstressed log-phase growth (control) Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion. -1.0964975410773
PubMed external link Harris MR et al., PloS one, 2013;8(4):e61059Harris MR et al., PloS one, 2013;8(4):e61059 Direct ChIP Positive S288c N/A N/A N/A
PubMed external link Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 Direct ChIP-exo N/A BY4741 Unstressed log-phase growth (control) YPD medium, 25.C N/A
PubMed external link Ros-Carrero C et al., Cell cycle (Georgetown, Tex.), 2024 May-Jun;23(9-12):817-833Ros-Carrero C et al., Cell cycle (Georgetown, Tex.), 2024 May-Jun;23(9-12):817-833 Direct ChIP N/A W303-1a Cell cycle/morphology SC medium (cell cycle) N/A