S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Hac1p	YFL032W	PubMed Kimata Y et al., Genes to cells : devoted to molecular & cellular mechanisms, 2006 Jan;11(1):59-69	Indirect	Microarray analysis - WT vs TF Deletion	Positive	BY4742	Unstressed log-phase growth (control)	Grown in SD medium (2% glucose, 0.66% yeast nitrogen base and appropriate auxotrophic supplements) solidified with 2% agar; or in liquid SC medium (SD medium supplemented with amino acids and vitamins) at 30 °C. Transcription factor gene deletion.	N/A
		PubMed Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - WT vs TF Deletion	Positive	BY4741; S288C; R1158	Unstressed log-phase growth (control)	Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion.	1.8097948923159
		PubMed Nair R et al., AMB Express, 2018 Jul 16;8(1):116	Indirect	RNA-seq - wt vs TF mutant	Positive	BrUn1362	Stress	Tunicamycin	N/A
			Indirect	RNA-seq - wt vs TF mutant	Positive	BrUn1362	Stress	5mM DTT	N/A
			Indirect	RNA-seq - wt vs TF mutant	Positive	BrUn1362	Unstressed log-phase growth (control)	Control, YPD, 30.C	N/A
			Indirect	Ribo-seq: WT vs TF mutant	Positive	BrUn1362	Stress	Tunicamycin	N/A
			Indirect	Ribo-seq: WT vs TF mutant	Positive	BrUn1362	Stress	5mM DTT	N/A