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Regulation Reference(s)
The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor |
Target
ORF/Genes |
References |
Evidence
Code |
Evidence
Experiment |
Association
Type |
Strain |
Environmental
Group |
Environmental
Condition |
Log2FC |
|
Rap1p
|
YGR054W
|
PubMed 
Lavoie H et al., PLoS biology, 2010 Mar 9;8(3):e1000329Lavoie H et al., PLoS biology, 2010 Mar 9;8(3):e1000329 |
Direct |
Chip-on-chip |
N/A |
S288c |
Unstressed log-phase growth (control) |
YPD |
N/A |
|
PubMed
Byun JY et al., Microbial cell factories, 2025 Feb 24;24(1):47Byun JY et al., Microbial cell factories, 2025 Feb 24;24(1):47 |
Indirect |
RNA-seq - wt vs TF overexpression |
Negative |
CEN.PK2-1D |
Carbon source quality/availability |
YPD medium (15h) (diauxic shift) |
-1.61419661768819 |
| Indirect |
RNA-seq - wt vs TF overexpression |
Negative |
CEN.PK2-1D |
Carbon source quality/availability |
YPD medium (36h) (post-diauxic shift) |
-1.44343672010101 |
| Indirect |
RNA-seq analysis - TF Over-expression vs WT |
Negative |
cen.pk-2-1C |
Unstressed log-phase growth (control) |
RNA extraction at 15h. Medium: YPD (1% yeast extract, 2% peptone, 2% glucose) or synthetic complete (SC) medium supplemented as required for auxotrophic markers. Temperature: 30°C, aerobic shaking. Growth phase: exponential or stationary phase. |
-3.06141073556643 |
| Indirect |
RNA-seq analysis - TF Over-expression vs WT |
Negative |
cen.pk-2-1C |
Carbon source quality/availability |
RNA extraction at 36h. Medium: YPD (1% yeast extract, 2% peptone, 2% glucose) or synthetic complete (SC) medium supplemented as required for auxotrophic markers. Temperature: 30°C, aerobic shaking. Growth phase: exponential or stationary phase. |
-2.71967963699504 |
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