S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Swi5p	YKL185W	PubMed Bobola N et al., Cell, 1996 Mar 8;84(5):699-709	Indirect	Northern blot - wt vs TF mutant	Positive	S288c	Unstressed log-phase growth (control)	YPD medium; mid-log phase	N/A
		PubMed Madhani HD et al., Proceedings of the National Academy of Sciences of the United States of America, 1999 Oct 26;96(22):12530-5	Direct	ChIP	N/A	S288c	Cell cycle/morphology	Exponential phase cells cultivated in YPD growth medium (60 minutes after cell-cycle synchronization)	N/A
		PubMed Simon I et al., Cell, 2001 Sep 21;106(6):697-708	Direct	Chip-on-chip	N/A	S288c	Unstressed log-phase growth (control)	YPD medium; mid-log phase	N/A
		PubMed Lee TI et al., Science (New York, N.Y.), 2002 Oct 25;298(5594):799-804	Direct	Chip-on-chip	N/A	S288c	Unstressed log-phase growth (control)	YPD medium; mid-log phase	N/A
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	Unstressed log-phase growth (control)	YPD medium; mid-log phase	N/A
		PubMed Voth WP et al., The EMBO journal, 2007 Oct 17;26(20):4324-34	Direct	ChIP	N/A	S288c	N/A	N/A	N/A
		PubMed Parnell EJ et al., The Journal of biological chemistry, 2014 Dec 19;289(51):35431-7	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	Unstressed log-phase growth (control)	SC medium	N/A
		PubMed Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314	Direct	ChIP-exo	N/A	BY4741	Unstressed log-phase growth (control)	YPD medium, 25.C	N/A