S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Rlm1p	YKR095W	PubMed Jung US et al., Molecular microbiology, 1999 Dec;34(5):1049-57	Indirect	Northern blot - wt vs TF mutant	Positive	EG123	Carbon source quality/availability	Cells grown to mid-log phase in raffinose-containing medium, then shifted to galactose-containing medium for 4 h	N/A
			Indirect	Northern blot - wt vs TF mutant	Positive	EG123	Stress	Cells grown to mid-log phase in YEPD, shifted from 23C to 39C	N/A
		PubMed García R et al., The Journal of biological chemistry, 2004 Apr 9;279(15):15183-95	Indirect	Microarray analysis - wt vs TF mutant	N/A	S288c	N/A	N/A	N/A
		PubMed Nunez LR et al., The Journal of biological chemistry, 2008 Dec 5;283(49):34204-17	Indirect	Northern blot - wt vs TF mutant	Positive	SHY933	Lipid supplementation	75 microm inositol medium (0 h) and shifted to 1 mm choline medium for 3.5 h	N/A
		PubMed García R et al., The Journal of biological chemistry, 2009 Apr 17;284(16):10901-11	Indirect	lacZ - wt vs TF mutant	Positive	BY4741	Stress	YPD or SD 0.8 unit/ml zymolyase for 3 h	N/A
		PubMed Sanz AB et al., Molecular biology of the cell, 2012 Jul;23(14):2805-17	Direct	ChIP	N/A	S288c	Stress	Congo red	N/A
		PubMed Sanz AB et al., Biochimica et biophysica acta. Gene regulatory mechanisms, 2018 Nov;1861(11):1029-1039	Direct	ChIP	N/A	BY4741	Stress	YP medium 2% glucose + Congo Red (30 microg/ml for 3 h)	N/A
			Indirect	lacZ - wt vs TF mutant	Positive	BY4741	Stress	YP medium 2% glucose + Congo Red (30 microg/ml for 3 h)	N/A
		PubMed Pulido V et al., Journal of molecular biology, 2024 May 15;436(10):168570	Direct	ChIP	N/A	BY4141	Unstressed log-phase growth (control)	SD medium	N/A
			Direct	ChIP	N/A	BY4141	Stress	SD medium + Congo Red	N/A