Yeastract
YEASTRACT+ INESC-ID IST IBB
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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor
Target
ORF/Genes
References Evidence
Code
Evidence
Experiment
Association
Type
Strain Environmental
Condition
Log2FC
Pho4p YLR109W PubMed external link Chua G et al., Proceedings of the National Academy of Sciences of the United States of America, 2006 Aug 8;103(32):12045-50Chua G et al., Proceedings of the National Academy of Sciences of the United States of America, 2006 Aug 8;103(32):12045-50 Indirect Microarray analysis - wt vs TF overexpression Positive N/A Cells grown in selective medium supplemented with 2% raffinose before induction with 2% galactose for 3 h N/A
PubMed external link He BZ et al., eLife, 2017 May 9;6():He BZ et al., eLife, 2017 May 9;6(): Indirect RNA-seq analysis - WT vs TF Deletion Positive K699 100 ml of cell culture grown to OD600nm (600 nm) of 1.5. 0.245187071001494
Indirect RNA-seq analysis - WT vs TF Deletion Positive K699 Grown in phosphate-free SC medium (Phosphate starvation) at 30°C with shaking. All transcriptional profiling experiments were done in the pho80∆ background. Transcription factor gene deletion. 0.245187071001494
PubMed external link van Heusden GPH, Genomics, 2023 Sep;115(5):110672van Heusden GPH, Genomics, 2023 Sep;115(5):110672 Indirect RNA-seq analysis - WT vs TF Deletion Positive BY4741 Grown overnight at 30 °C in phosphate-free YNB medium supplemented with 7.2 mM potassium phosphate (pH 5.8), 20 mg/L histidine, leucine, methionine, and uracil, and 50 mM KCl, then used to inoculate 50 mL cultures at OD620 = 0.1 and grown at 30 °C, 180 rpm to OD620 = 0.5. Transcription factor gene deletion. 0.208276677343641