Yeastract
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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Group		 Environmental
Condition		 Log2FC
Rap1p YLR194C PubMed external link Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77 Indirect Microarray analysis - WT vs TF Deletion Positive BY4741; S288C; R1158 Unstressed log-phase growth (control) Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion. 1.1619432759394
PubMed external link Byun JY et al., Microbial cell factories, 2025 Feb 24;24(1):47Byun JY et al., Microbial cell factories, 2025 Feb 24;24(1):47 Indirect RNA-seq - wt vs TF overexpression Positive CEN.PK2-1D Carbon source quality/availability YPD medium (15h) (diauxic shift) 1.23305498150955
Indirect RNA-seq - wt vs TF overexpression Negative CEN.PK2-1D Carbon source quality/availability YPD medium (36h) (post-diauxic shift) -1.69448885280208
Indirect RNA-seq - wt vs TF overexpression Negative CEN.PK2-1D Unstressed log-phase growth (control) YPD medium (9h) control -1.12568020051023
Indirect RNA-seq analysis - TF Over-expression vs WT Positive cen.pk-2-1C Unstressed log-phase growth (control) RNA extraction at 15h. Medium: YPD (1% yeast extract, 2% peptone, 2% glucose) or synthetic complete (SC) medium supplemented as required for auxotrophic markers. Temperature: 30°C, aerobic shaking. Growth phase: exponential or stationary phase. 2.3506422387625
Indirect RNA-seq analysis - TF Over-expression vs WT Negative cen.pk-2-1C Carbon source quality/availability RNA extraction at 36h. Medium: YPD (1% yeast extract, 2% peptone, 2% glucose) or synthetic complete (SC) medium supplemented as required for auxotrophic markers. Temperature: 30°C, aerobic shaking. Growth phase: exponential or stationary phase. -3.23662192709863
Indirect RNA-seq analysis - TF Over-expression vs WT Negative cen.pk-2-1C Unstressed log-phase growth (control) RNA extraction at 9h. Medium: YPD (1% yeast extract, 2% peptone, 2% glucose) or synthetic complete (SC) medium supplemented as required for auxotrophic markers. Temperature: 30°C, aerobic shaking. Growth phase: exponential or stationary phase. -2.18204401091458