S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Sko1p	YML131W	PubMed Rep M et al., Molecular microbiology, 2001 Jun;40(5):1067-83	Indirect	Northern blot - wt vs TF mutant	Negative	W303-1A	Stress	Osmotic shock; 0.7 M NaCl added to cells grown in YPD medium to mid-exponential phase	N/A
		PubMed Capaldi AP et al., Nature genetics, 2008 Nov;40(11):1300-6	Direct	ChIP	N/A	S288c	N/A	N/A	N/A
		PubMed Ni L et al., Genes & development, 2009 Jun 1;23(11):1351-63	Direct	Chip-on-chip	N/A	S288c	Unstressed log-phase growth (control)	SD medium	N/A
			Direct	Chip-on-chip	N/A	S288c	Stress	SD medium + NaCl 0,6M	N/A
		PubMed Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - WT vs TF Deletion	Negative	BY4741; S288C; R1158	Unstressed log-phase growth (control)	Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion.	-1.1920539712345
		PubMed Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314	Direct	ChIP-exo	N/A	BY4741	Unstressed log-phase growth (control)	YPD medium, 25.C	N/A