Yeastract
YEASTRACT+ INESC-ID IST IBB
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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Group		 Environmental
Condition		 Log2FC
Rds2p YNL065W PubMed external link Soontorngun N et al., Molecular and cellular biology, 2007 Nov;27(22):7895-905Soontorngun N et al., Molecular and cellular biology, 2007 Nov;27(22):7895-905 Direct ChIP N/A S288c Unstressed log-phase growth (control) Growth in YPD growth medium with 2% glucose as carbon source N/A
PubMed external link Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77 Indirect Microarray analysis - WT vs TF Deletion Negative BY4741; S288C; R1158 Unstressed log-phase growth (control) Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion. -1.6225076473125
PubMed external link Soontorngun N et al., Biochemical and biophysical research communications, 2012 Jul 13;423(4):632-7Soontorngun N et al., Biochemical and biophysical research communications, 2012 Jul 13;423(4):632-7 Direct Chip-on-chip N/A S288c Carbon source quality/availability YEP medium + 2%glycerol exponential phase N/A
PubMed external link Holland P et al., Nucleic acids research, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic acids research, 2019 Jun 4;47(10):4986-5000 Direct ChIP-exo N/A CEN.PK 113-5D Carbon source quality/availability Cells were cultivated in chemostats in anaerobic glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h N/A
Direct ChIP-exo N/A CEN.PK 113-5D Carbon source quality/availability Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h N/A
Direct ChIP-exo N/A CEN.PK 113-5D Nitrogen source quality/availability Cells were cultivated in chemostats in nitrogen limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h N/A
Direct ChIP-exo N/A CEN.PK 113-5D Carbon source quality/availability Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h N/A
PubMed external link Martinez KP et al., Nucleic acids research, 2024 Mar 21;52(5):2242-2259Martinez KP et al., Nucleic acids research, 2024 Mar 21;52(5):2242-2259 Direct ChiP-chip N/A BY4741 Carbon source quality/availability YP Ethanol medium N/A