Yeastract
YEASTRACT+ INESC-ID IST IBB
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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Group		 Environmental
Condition		 Log2FC
Aft1p YOL158C PubMed external link Yun CW et al., The Journal of biological chemistry, 2000 Apr 7;275(14):10709-15Yun CW et al., The Journal of biological chemistry, 2000 Apr 7;275(14):10709-15 Indirect Northern blot - wt vs TF overexpression Positive S288c Unstressed log-phase growth (control) SD medium N/A
PubMed external link Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 Direct Chip-on-chip N/A S288c N/A N/A N/A
PubMed external link Courel M et al., Molecular and cellular biology, 2005 Aug;25(15):6760-71Courel M et al., Molecular and cellular biology, 2005 Aug;25(15):6760-71 Indirect Microarray WT vs TF mutant Positive Y14438 Ion/metal/phosphate/sulfur/vitamin availability Iron-depleted conditions - Defined medium (iron-limiting and copper-limiting yeast nitrogen base ); 30.C. N/A
Indirect Microarray analysis - wt vs TF mutant Positive SCMC01 Ion/metal/phosphate/sulfur/vitamin availability Iron-depleted conditions - Defined medium (iron-limiting and copper-limiting yeast nitrogen base ); 30.C. N/A
PubMed external link Dubacq C et al., Molecular genetics and genomics : MGG, 2006 Feb;275(2):114-24Dubacq C et al., Molecular genetics and genomics : MGG, 2006 Feb;275(2):114-24 Indirect Microarray analysis - wt vs TF mutant Positive S288c Unstressed log-phase growth (control) YPD N/A
PubMed external link Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77 Indirect Microarray analysis - WT vs TF Deletion Positive BY4741; S288C; R1158 Unstressed log-phase growth (control) Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion. 1.4243030885737
PubMed external link Berthelet S et al., Genetics, 2010 Jul;185(3):1111-28Berthelet S et al., Genetics, 2010 Jul;185(3):1111-28 Indirect Microarray analysis - WT vs TF Deletion Positive YKB779 Unstressed log-phase growth (control) Grown in YPD at 30°C to OD600 of 0.4. Transcription factor gene deletion. 2.277044
PubMed external link Jaehnig EJ et al., Cell reports, 2013 Jul 11;4(1):174-88Jaehnig EJ et al., Cell reports, 2013 Jul 11;4(1):174-88 Indirect Microarray analysis - wt vs TF mutant Positive S288c N/A N/A N/A