Yeastract
Please fill in
here
our
user satisfaction survey
Thank you!
YEASTRACT+
Home
> Rank Genes by TF
Contact/Credits
Tutorial
Help
Modelling prediction
Essentiality
[metab] Optimisation
manipulating gene expression
manipulating TF expression
Cross species
Promoter analysis
Homologous network
Network comparison
Rank by Unique TFBS
Rank genes
Rank by TF
Rank by GO
Regulatory Associations
Search for TFs
Search for Genes
Search for Associations
Pattern Matching
Search by DNA Motif
Find TF Binding Site(s)
Utilities
Search for Orthologs
IUPAC Code Generation
ORF List ⇔ Gene List
Retrieve
TF-Consensus List
Regulation Matrix
Upstream Sequence
About
Contact/Credits
How to cite
Terms of Usage
Acknowledgments
Data submission form
Back to top
Rank based on unique TF binding sites in homologous genes
Transcription factors
Target ORF/Genes
Check for all TFs
Search for Homologous Regulations in:
Species:
Candida albicans SC5314
Candida auris B8441
Candida glabrata CBS138
Candida parapsilosis CDC317
Candida tropicalis MYA-3404
Kluyveromyces lactis NRRL Y-1140
Kluyveromyces marxianus DMKU3-1042
Komagataella phaffii GS115
Rhodotorula toruloides NP11
Saccharomyces sp. 'boulardii' biocodex
Saccharomyces sp. 'boulardii' unique28
Schizosaccharomyces pombe 972h-
Yarrowia lipolytica CLIB122
Zygosaccharomyces bailii IST302
Synteny Level:
BLAST Best-Scores (Only Homology)
BLAST Best-Scores + at least 1 neighbor
BLAST Best-Scores + at least 2 neighbors
BLAST Best-Scores + at least 3 neighbors
Rank genes by TF using:
The % of genes in the list and in YEASTRACT regulated by each TF
Consider only potential regulations that are supported by documented regulations