S.cerevisiae - Yeastract

Locus Information

Standard Name	PRP16
Systematic Name	YKR086W
Alias	PRP23, RNA16
Strain	S288c
Description	DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation; exhibits ATP-dependent RNA unwinding activity; mediates the release of Yju2p and Cwc25p in the second step; in the absence of ATP, stabilizes the binding of Cwc25p to the spliceosome in the first catalytic step; missense mutation in human ortholog DHX38 associated with early-onset retinitis pigmentosa
External sources	Open in SGD Open in KEGG

Gene Sequence Download FASTA Hide Seq	>PRP16 YKR086W ATGGGTCATTCGGGGCGTGAGGAAAGGATAAAAGACATATTTAAGGAACTTACGTCAAAA GAACTAACGCCTGGGTTGCTTTTGACACTGCAGAAACTAGCGCAAAAGCCGAATACTAAT CTAGAACAGTTTATTGCCAGCTGTAAAGCTTTGACGAAACTCAGCAGTAACAATCCAATC ATTTTTAATGAACTTCTGGAGCTCCTCAAGAATAAATCTGAAGAGGACTCGACAGGCCCA AAGAAAATCGCCCCTTCTATAAATAAGAGAAAGAAATTTAAGATCCAGTTAGACCTTGAC GATAATGAAGATGAGCTAGATTCTCCAGTTCAAAAAAAACCAGCACCTACACGGACGTTG TTCAAGAGAATAGATAAACTAAAGGCCAAACAGTTGAGGCAGTATTCGCCCACCGTGAAG GATCCTTCTCCAAATAGTGAACAGCAAACACAGAATGGTCATGCTGAAACGAAGGACTAT GAACCGACTCGAAGCGAAGTAGTTGAGGAGGACAGAGAATGGTATGATAATGATGATGAT TATGGAAATTTGGTGCCTGAACCTCTGTCTGAATTGCCTGAGGAAGCGAAACTACTACCT GTCATTAGGAATATCGACAACGATGATGCCTTACGAAATACCGTTCAATTATACCCCATA CCACTCAAGCAAAGAATGGAATGGATCCCTCCTTTTTTATCAAAGTTTGCTCTTGAAAAC AAAGTGCCCACTTCCATAATTATCGGGTCCATCTCTGAGACGTCCAGCCAAGTATCCGCT TTATCAATGGTGAATCCATTTAGGAATCCTGACAGTGAATTTTCTGCGAACGCCAAACGA GGTAGTAAGCTGGTTGCCTTGAGAAGGATAAACATGGAACATATTCAACAATCTCGAGAC AACACCACTGTTTTGAACACTGCCATGGGGGAAGTACTAGGCTTGGAGAATAACAATAAA GCAAAAGATAAGAGCAACCAAAAGATTTGCGACGATACAGCTCTTTTCACGCCATCAAAA GATGACATTAAACATACTAAAGAGCAACTGCCTGTTTTCCGCTGCAGATCTCAATTGTTA TCATTGATAAGAGAAAATCAAGTAGTGGTGATAATTGGTGAAACGGGCTCAGGTAAAACC ACGCAACTTGCACAGTATTTATATGAAGAAGGATATGCCAACGATAGGGGGAAATCTATT GTTGTCACACAGCCGAGAAGAGTAGCAGCCATATCCGTTGCAAAAAGGGTTGCAATGGAA ATGCAAGTTCCATTGGGTAAGGAAGTAGGCTATTCTATAAGGTTTGAAGATGTGACGGAT TCTGAGTGTACAAAACTTAAGTTTGTAACGGATGGTATTCTACTCAGAGAGACCTTATTG GATGATACACTCGATAAATATTCGTGTGTTATTATTGATGAAGCTCATGAAAGGTCATTA AATACAGACATTTTACTAGGTTTTTTCAAGATTTTATTAGCACGTAGAAGAGATCTAAAA CTCATAATCACTTCAGCAACAATGAATGCGAAGAAGTTCTCCGCATTTTTTGGTAATGCT CCTCAGTTCACAATTCCTGGAAGAACTTTCCCCGTACAGACCATATATACTTCCAACCCT GTTCAAGACTACGTAGAAGCTGCAGTTTCTCAGGCTGTGAAAATTCATTTAGCAAACGAT TGTTCAAGCGGTGATATTCTCATTTTCATGACAGGTCAAGAAGATATTGAAACAACGTTC GACACTCTGCAAGAAAAGTTTTTGCAAGTATATTCTAAAAAGTTTGGTACCGCAAACTTT GAAGAGATCAATGATATTGAAATTTTACCAATCTACTCGGCTTTACCTGCAGATTTGCAA TTCAAAATTTTTCAGGATCTACATGGCACTAAAAGGAAAATTATAATTGCGACAAATATT GCAGAGACTTCATTGACCATTAAAGGTATTAGATATGTCATTGATTGTGGTTACTCTAAA CTGAAAGTTTACAATCCAAAGATTGGGCTTGATAGTTTAGTAATAACGCCCATATCAAAA GCTAACGCCGACCAAAGATCCGGAAGAGCGGGAAGAACTGCGCCAGGCACTGCATATCGA TTATACACGGAAGATACATTCAAAGAAGATATGTACTTACAGACAATACCTGAGATCCAA AGAACGAATTTGTCAAACACCCTTTTACTGCTAAAATCTCTGGACGTTACTGACGAATTG AGTAAGTTCCCGTTCATTGATAAACCACCCTTACAAACATTTTTATCCTCATTGTATGAG TTATGGTTCATAGGGGCTATAGACACTAGTGGACAATTGACTCCATTGGGATTACAGATG GCAAAATTTCCCCTGCAACCTTCCCTTTCCAAAATTTTATTAATTGCAGTTAGAAACGGC TGCAGTGATGAAATGTTAACAATAGTTTCCATGCTTTCTGTTCCACAAGTCTTTTATAGA CCCAAGGAAAGACAGAAAGAAGCAGATATTGCTAGAAATAAATTTTTTATCGCGAAATCA GATCACTTAACGTTACTTAATGTTTTTGAACAATGGAGGGCAAATAATTTTAGTTCGCAT TGGTGTAACAAACATTTTGTTCAATACAAATCACTTGTCAGGGCAAGAGACATTCGAGAC CAGTTGCTAACAATACTAAAATCTCAAAAAATTCCGGTCATTTCCTCCGGTAAGGACTGG GATATTATTAAAAAATGTATTTGTTCAGGATTTGCTCATCAAGCAGCCAAAATAACAGGA CTACGAAATTACGTTCATTTAAAAACTGGCGTAAGTGTTCAACTACACCCTACAAGTGCA TTACACGGATTGGGGGATTTACCCCCTTACGTGGTATATCATGAATTATTAATGACTAGC AAAGAATACATTTGTTGTGTTACTTCTGTAGATCCATTCTGGTTAATGGAATATGGTGGG TTACTCTACGACATCAAGCGTATTAAAAATGATCAGGAGGCCACAACTACAGGCCTCTTT GGTGAACACTATGAACATACTCTGGACAAGGTTGAAGATGATATTGATATCAATATTAGG AGATGTAAGGATATGAGAGACAGTGTGATACAGGAGCTCAAAATGACCGACAATTCAAAC AAAGAAGACAAAAAGCAAAAAACGAAAAAGCAAAATATACTGAACGGCAAAGAAAATTCA ATGAAACCTTTCAAAAGAAGGAAGCCTTTTTTTTAG
Promoter Sequence Download FASTA	>PRP16 YKR086W CGTCTGCTCCATCGCTGTAGTCACTGTAAGCCATCTCGATAGTCAATAGTTGTCGAAGCA GAAGCCTTTGGGTGTCTCCAAGCTGTACTTAACTCTTTTTAAATTGCTTATTGGTTAGCT TTCATGTGGTATATTCAAGTCACATTAATGGGCGTCTCCGTGCATTGTGATCAATATATG AATACGAAGTACTTATAGAGTAGTATTTACACGATTGTTATTATATTTATATAGCATTCA CGCCTGGTACCACAGGAGTTTTCTACGCTTACGGTCCTCTCTGGCTATACGCCTCTTCTC CTTCCAGCGTGATTGGATTTCTTGCAATCTACTTTCCATAATTTGTACATGTTGTTCACT AGGTTTCGAGACCATGGATACAAATAATGGCGAAATGCCATATTTTGCAGCCAAAAATTT GCGTGTATACTTTTGAGGATTGTCAAGACGTAACTTCCGGATCTCATCAATTTCTTGAGG TCCCAGATGATAGGTTTTGCCGTTCACTGTGCTCTTACCTACGAGAACATTTGGACACTG CTTCGCTTTAGTGCTTTGAACAGGCATGTCAAGCCCTCTACGAGGGTCACTGGCTGCCAT AAAGCTACGTGGAATGGTCTCACTGTTAACAGATCCGGTTGCGATGGATTCTGATGGTTG ATAGTACATTCCTGGAGCATCTCTGTGCTTTAAATACCCTTTATAGTTAGATGCGCTCTT AGTCTTGTTGTAAATCGTTGTCACTTGTGTTTTGGGAAATCCAAATTGCTTCCAGGCAGA TCCAGCAGTGTGGAACGATCTGCAGCACACACCTCTGCCAATCATTCTTGTGCTATTTTA CTTTGTCTTTAATTTTCCATTTTAACTTGTTGAAAGTATCTCTTTTTGCCCTCTTTTCTA TTTTCTCAAATAATAAAAGCGGTGAAAGCTGAAAAATTCATGAGATGACTGCAGATGATA AAACACAAGAAGGCCCAAAGACAATACAAATACCTCTGGT
Chr coordinates	Chr XI from 599857-603072