C.tropicalis - PathoYeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

CTRG_00218

Promoter Sequence

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -966 -965 -964 -963 -962 -961 -960 -959 -958 -957 -956 -955 -954 -953 -952 -951 -950 -949 -948 -947 -946 -945 -944 -943 -942 -941 -940 -939 -938 -937 -936 -935 -934 -933 -932 -931 -930 -929 -928 -927 -926 -925 -924 -923 -922 -921 -920 -919 -918 -917 -916 -915 -914 -913 -912 -911 -910 -909 -908 -907 -906 -905 -904 -903 -902 -901 -900 -899 -898 -897 -896 -895

>CTRG_00218    upstream sequence, from -1000 to -1, size 1000
TTTAATCCATTTTATCAATATAATCCATATGATCNNNNNNNNNNNNNNNNNNNNNNNNNN
NNN>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>NNNNNCAAATGAAGAAACTGAATATTTAATTAAATCCTCTCAAGCTGTGGA
TATTATTAATGGTGAAATTAAATCAAATGCATTACCTGATCATGTATCAATGTTGATTAA
TTCAAGAAATTTCAATTGATCAATCATCAATATCCAATAATTGAAAAATTTAAACAAAGA
TATTTTAAAAATTACTTCAAAATATAATCTTGGATTTATATTAAATAATAAAGAAATAAT
TCCAAATTGATTCAACTAATGGATATTTTAATTATACAATTAATGAAGTACTTGAACCTG
CTCCAATTTCTCCAATTGATGGGAAAAGTTGGGAAATTTATAGTGGGTCATTAAGATATT
TATTTGAAGATTTAATATTTCCTTCAAATGATTCATCTATAATTGTATCTCCTTATTTAG
CTATTGGTAATACTGATACTAAGAGTTATTGGGGATTATCGGAAAATATTTATCGATATC
AACCAAATATCAATTCTAAAAATTCAAATATCCATACTATTAATGAGAAATTATTATTTG
AAGGTCATTTACAAATTATGAGTTTTTATTATTTCTACTTACAAGTAATTGACAATATTG
ATGAATTGTAACAGTACAAATATCAAGGGTATATATATATATATATATATATATATATAT
ATATGTGTGTGTATAAAATGAATGATAAAAATCACGTGATGTTGTTACTTTTGCGCTACC
AACTGTATATACACGACATTTATTCAATGTCGTCGACCCCATGTGTACGACAAATCACAA
AAATTTTTAATTAATTTTTTTTTTTCTTTTCCAATCAACTCATCATCATTGTCATCATCA
TCATCATCATCTCGTAGTCAAAACCCAACATACCTCCCCT

Promoter Sequence
Complementary Strand

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -858 -864 -866 -867 -868 -869 -870 -871 -872 -873 -874 -875 -876 -877 -878 -879 -880 -881 -882 -883 -884 -885 -886 -887 -888 -889 -890 -891 -892 -893 -894 -895 -896 -897 -898 -899 -900 -901 -902 -903 -904 -905 -906 -907 -908 -909 -910 -911 -912 -913 -914 -915 -916 -917 -918 -919 -920 -921 -922 -923 -924 -925 -926 -927 -928 -929 -930 -931 -932 -933 -934 -935 -936 -937

>CTRG_00218	Upstream Sequence Complementary Strand
AAATTAGGTAAAATAGTTATATTAGGTATACTAGNNNNNNNNNNNNNNNNNNNNNNNNNN
NNN>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>NNNan>NNGTTTACTTCTTTGACTTATAAATTAATTTAGGAGAGTTCGACACCT
ATAATAATTACCACTTTAATTTAGTTTACGTAATGGACTAGTACATAGTTACAACTAATT
AAGTTCTTTAAAGTTAACTAGTTAGTAGTTATAGGTTATTAACTTTTTAAATTTGTTTCT
ATAAAATTTTTAATGAAGTTTTATATTAGAACCTAAATATAATTTATTATTTCTTTATTA
AGGTTTAACTAAGTTGATTACCTATAAAATTAATATGTTAATTACTTCATGAACTTGGAC
GAGGTTAAAGAGGTTAACTACCCTTTTCAACCCTTTAAATATCACCCAGTAATTCTATAA
ATAAACTTCTAAATTATAAAGGAAGTTTACTAAGTAGATATTAACATAGAGGAATAAATC
GATAACCATTATGACTATGATTCTCAATAACCCCTAATAGCCTTTTATAAATAGCTATAG
TTGGTTTATAGTTAAGATTTTTAAGTTTATAGGTATGATAATTACTCTTTAATAATAAAC
TTCCAGTAAATGTTTAATACTCAAAAATAATAAAGATGAATGTTCATTAACTGTTATAAC
TACTTAACATTGTCATGTTTATAGTTCCCATATATATATATATATATATATATATATATA
TATACACACACATATTTTACTTACTATTTTTAGTGCACTACAACAATGAAAACGCGATGG
TTGACATATATGTGCTGTAAATAAGTTACAGCAGCTGGGGTACACATGCTGTTTAGTGTT
TTTAAAAATTAATTAAAAAAAAAAAGAAAAGGTTAGTTGAGTAGTAGTAACAGTAGTAGT
AGTAGTAGTAGAGCATCAGTTTTGGGTTGTATGGAGGGGA