C.tropicalis - PathoYeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

CTRG_01105

Promoter Sequence

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -356 -355 -354 -353 -352 -351 -350 -349 -348 -347 -346 -345 -344 -343 -342 -341 -340 -339 -338 -337 -336 -335 -334 -333 -332 -331 -330 -329 -328 -327 -326 -325 -324 -323 -322 -321 -320 -319 -318 -317 -316 -315 -314 -313 -312 -311 -310 -309 -308 -307 -306 -305 -304 -303 -302 -301 -300 -299 -298 -297 -296 -295 -294 -293 -292 -291 -290 -289 -288 -287 -286 -285 -284 -283 -282 -281 -280 -279 -278 -277 -276 -275 -274 -273 -272 -271 -270 -269 -268 -267 -266 -265 -264 -263 -262 -261 -260 -259 -258 -257 -256 -255 -254 -253 -252 -251 -250 -249 -248 -247 -246 -245 -244 -243 -242 -241 -240 -239 -238 -237 -236 -235 -234 -233 -232 -231 -230 -229 -228 -227 -226 -225 -224 -223 -222 -221 -220 -219 -218 -217 -216 -215 -214 -213 -212 -211 -210 -209 -208 -207 -206 -205 -204 -203 -202 -201 -200 -199 -198 -197 -196 -195 -194 -193 -192 -191 -190 -189 -188 -187 -186 -185 -184 -183 -182 -181 -180 -179 -178 -177 -176 -175 -174 -173 -172 -171 -170 -169 -168 -167 -166 -165 -164 -163

>CTRG_01105    upstream sequence, from -1000 to -1, size 1000
GAAGATCAACCCATATCTGAACTTAACCTTGATCAATTAAGAGAATTTTATCTGAGTAAT
AATCAGTTGAGAATTTTGGAAGGTTTGCCAGAAACTACTACTCCACCAAAGGAAAATTTC
AAACTAGATTTGAGAGGCTATCAAAAACATGGGCTATCCTGGATGTTGGCTAGAGAAAAA
GAGTTGGACGTTTTAGAAATGATTCTGAATGATGACAAATTATCGACCCAAGCAAGAAGT
GAATTAGAAAGTTTAGGTAGTGTGAACCCACTTTGGCGAAAGTACAGATGGCCCGACTCA
CAACAGGATTCGCAAGATCCTACTCAAAGTCAAACGGAAAAGTATTTTTATGCTAACATG
TATAATGGGGAACTTTCTCTTGAAAAACCTGTTATAAAATCTAGTTTACGTGGAGGCATT
TTGGCAGACGAAATGGGGTTGGGAAAAACCATATCTACACTTGCATTAATCAATTCGGTT
CCGTATGATAACTCGCCACAGTTGTTAAAACCAAAGAAACCATATGCATCGCGAACCACT
TTGATTGTTGTACCAATGTCTTTATTATCTCAATGGAAGAGTGAGTTTGAGAAGTGTAAT
ACTAATAGAGCCCACTTTTGCCGTTTACATTATGGGGATGACCANNNNNNNNNNNNNNNN
NNNNNNNNNNNNN>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNNTTCTCACCCGATTAACCAAGAACGTAATTCCAAGGG
TGAGTTGCCACGAGTTGGACTTTATTCAGTGAAATTTTTCAGAATAATTCTAGATGAAGG
TCATAATATTCGTAATCGAAACACAATTACTGCAAAATCA

Promoter Sequence
Complementary Strand

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -136 -137 -138 -139 -140 -141 -142 -143 -144 -145 -146 -147 -148 -149 -150 -151 -152 -153 -154 -155 -156 -157 -158 -159 -160 -161 -162 -163 -164 -165 -166 -167 -168 -169 -170 -171 -172 -173 -174 -175 -176 -177 -178 -179 -180 -181 -182 -183 -184 -185 -186 -187 -188 -189 -190 -191 -192 -193 -194 -195 -196 -197 -198 -199 -200 -201 -202 -203 -204 -205 -206 -207 -208 -209 -210 -211 -212 -213 -214 -215 -216 -217 -218 -219 -220 -221 -222 -223 -224 -225 -226 -227 -228 -229 -230 -231 -232 -233 -234 -235 -236 -237 -238 -239 -240 -241 -242 -243 -244 -245 -246 -247 -248 -249 -250 -251 -252 -253 -254 -255 -256 -257 -258 -259 -260 -261 -262 -263 -264 -265 -266 -267 -268 -269 -270 -271 -272 -273 -274 -275 -276 -277 -278 -279 -280 -281 -282 -283 -284 -285 -286 -287 -288 -289 -290 -291 -292 -293 -294 -295 -296 -297 -298 -299 -300 -301 -302 -303 -304 -305 -306 -307 -308 -309 -310 -311 -312 -313 -314 -315 -316 -317 -318 -319 -320 -321 -322 -323 -324 -325 -326 -327 -328

>CTRG_01105	Upstream Sequence Complementary Strand
CTTCTAGTTGGGTATAGACTTGAATTGGAACTAGTTAATTCTCTTAAAATAGACTCATTA
TTAGTCAACTCTTAAAACCTTCCAAACGGTCTTTGATGATGAGGTGGTTTCCTTTTAAAG
TTTGATCTAAACTCTCCGATAGTTTTTGTACCCGATAGGACCTACAACCGATCTCTTTTT
CTCAACCTGCAAAATCTTTACTAAGACTTACTACTGTTTAATAGCTGGGTTCGTTCTTCA
CTTAATCTTTCAAATCCATCACACTTGGGTGAAACCGCTTTCATGTCTACCGGGCTGAGT
GTTGTCCTAAGCGTTCTAGGATGAGTTTCAGTTTGCCTTTTCATAAAAATACGATTGTAC
ATATTACCCCTTGAAAGAGAACTTTTTGGACAATATTTTAGATCAAATGCACCTCCGTAA
AACCGTCTGCTTTACCCCAACCCTTTTTGGTATAGATGTGAACGTAATTAGTTAAGCCAA
GGCATACTATTGAGCGGTGTCAACAATTTTGGTTTCTTTGGTATACGTAGCGCTTGGTGA
AACTAACAACATGGTTACAGAAATAATAGAGTTACCTTCTCACTCAAACTCTTCACATTA
TGATTATCTCGGGTGAAAACGGCAAATGTAATACCCCTACTGGTNNNNNNNNNNNNNNNN
NNNNNNNNNNNN>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNNNNAAGAGTGGGCTAATTGGTTCTTGCATTAAGGTTCCC
ACTCAACGGTGCTCAACCTGAAATAAGTCACTTTAAAAAGTCTTATTAAGATCTACTTCC
AGTATTATAAGCATTAGCTTTGTGTTAATGACGTTTTAGT