C.tropicalis - PathoYeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

CTRG_03217

Promoter Sequence

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -368 -367 -366 -365 -364 -363 -362 -361 -360 -359 -358 -357 -356 -355 -354 -353 -352 -351 -350 -349 -348 -347 -346 -345 -344 -343 -342 -341 -340 -339 -338 -337 -336 -335 -334 -333 -332 -331 -330 -329 -328 -327 -326 -325 -324 -323 -322 -321 -320 -319 -318 -317 -316 -315 -314 -313 -312 -311 -310 -309 -308 -307 -306 -305 -304 -303 -302 -301 -300 -299 -298 -297 -296

>CTRG_03217    upstream sequence, from -1000 to -1, size 1000
GATGACGATGACGATGACGATGATGATGATGAAAAGGACGTAGATTCTGATAATAGTTTC
CAATATTTGGTAATATCAGGGGAGCCATACGATAATATTACCATTGTAATTCCTAATGAT
AAAGAAATTGACAAGCCAGTTGAAGAAAACAAGATGTCTGATAGTTATTGGTGGTATTGG
GATAATGATACAAAGGAGTTTTTCATACAGTTTTTGTATAAGAAGTAGTATATATATATA
TATATATATATATAATAAGAAAGATAAAGTGGTTCTGGTTATAATAGCGTGCTTAGTCAT
CCCCCACGAATCACATGATCAGACCCCACTGTAATTCTCTCCTGTTTTTTCCGTGTACAT
ATAAAATTAGGTTGACGTTGAACGAGGAAGAGGAAGAAAATTAATTTTCCAATATCGGAC
ATACAATTTAATCTGAGTTTAACTTGTATAATTCAGTGATTTCCTCCATTAAGTACAAGA
GATAGTCACCCTCTCGATTATTTATACTTACAGTAGATGACAAATCAACATACAAGAGAT
ACACAAGTCGGTTTTTTACAAAGATGTGCTGAATGTTACAACTTGGTGCAAAATTTCTTA
CACGATCGAGTTCCCACTACTATAAATGGCACTNNNNNNNNNNNNNNNNNNNNNNNNNNN
>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>NNNNNGAATCCAGTCCAAACCAGAAAAGTGGATTCTTAGTATTGATAAATTA
GGAGGAATCCATTAGATTTACCATGGGTATGTTCTTTTCTACTAGTTGTTGTTGTTTCTT
TGACATTCTTTGCTTTTCTATAAGCTTAGAATGGTATTGAAAAGTAACATTTTTTTAATT
TTTTGGGATATAGAAAATGACATTTACTAACTAATATTCAATCACTTATAGTCTTCAGGA
AATAGCTATATCATATAATGGGGGTAAGGATTGTCTTGTC

Promoter Sequence
Complementary Strand

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -264 -267 -268 -269 -270 -271 -272 -273 -274 -275 -276 -277 -278 -279 -280 -281 -282 -283 -284 -285 -286 -287 -288 -289 -290 -291 -292 -293 -294 -295 -296 -297 -298 -299 -300 -301 -302 -303 -304 -305 -306 -307 -308 -309 -310 -311 -312 -313 -314 -315 -316 -317 -318 -319 -320 -321 -322 -323 -324 -325 -326 -327 -328 -329 -330 -331 -332 -333 -334 -335 -336 -337 -338

>CTRG_03217	Upstream Sequence Complementary Strand
CTACTGCTACTGCTACTGCTACTACTACTACTTTTCCTGCATCTAAGACTATTATCAAAG
GTTATAAACCATTATAGTCCCCTCGGTATGCTATTATAATGGTAACATTAAGGATTACTA
TTTCTTTAACTGTTCGGTCAACTTCTTTTGTTCTACAGACTATCAATAACCACCATAACC
CTATTACTATGTTTCCTCAAAAAGTATGTCAAAAACATATTCTTCATCATATATATATAT
ATATATATATATATTATTCTTTCTATTTCACCAAGACCAATATTATCGCACGAATCAGTA
GGGGGTGCTTAGTGTACTAGTCTGGGGTGACATTAAGAGAGGACAAAAAAGGCACATGTA
TATTTTAATCCAACTGCAACTTGCTCCTTCTCCTTCTTTTAATTAAAAGGTTATAGCCTG
TATGTTAAATTAGACTCAAATTGAACATATTAAGTCACTAAAGGAGGTAATTCATGTTCT
CTATCAGTGGGAGAGCTAATAAATATGAATGTCATCTACTGTTTAGTTGTATGTTCTCTA
TGTGTTCAGCCAAAAAATGTTTCTACACGACTTACAATGTTGAACCACGTTTTAAAGAAT
GTGCTAGCTCAAGGGTGATGATATTTACCGTGANNNNNNNNNNNNNNNNNNNNNNNNNNN
NN>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>NNNNNCTTAGGTCAGGTTTGGTCTTTTCACCTAAGAATCATAACTATTTAAT
CCTCCTTAGGTAATCTAAATGGTACCCATACAAGAAAAGATGATCAACAACAACAAAGAA
ACTGTAAGAAACGAAAAGATATTCGAATCTTACCATAACTTTTCATTGTAAAAAAATTAA
AAAACCCTATATCTTTTACTGTAAATGATTGATTATAAGTTAGTGAATATCAGAAGTCCT
TTATCGATATAGTATATTACCCCCATTCCTAACAGAACAG