C.albicans - PathoYeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

C4_03990C_B

Promoter Sequence

Consensus
GGAAAWDHAHDTCCRM: -482 -481 -480 -479 -478 -477 -476 -475 -474 -473 -472 -471 -470 -469 -468 -467 -466 -465 -464 -463 -462 -461 -460 -459 -458 -457 -456 -455 -454 -453 -452 -451 -450 -449 -448 -447 -446 -445 -444 -443 -442 -441 -440 -439 -438 -437 -436 -435 -434 -433 -432 -431 -430 -429 -428 -427 -426 -425 -424 -423 -422 -421 -420 -419 -418 -417 -416 -415 -414 -413 -412 -411 -410 -409 -408 -407 -406 -405 -404 -403 -402 -401 -400 -399 -398

>C4_03990C_B    upstream sequence, from -1000 to -1, size 1000
AGATTTCAATTCTAATAGTTTTTTATCCTTTTGATTCTTCTTGGCTAATCGTTTCAATTG
ATTTTTCGATAATGGTCGATATTCATCTTCTAAATGTTTAATTGATGAAGTAGTATCACA
TAATGTTGGTGTATCTTGAAATAATAATGATTCATGATCCAAATCTTCAAATGCAGTGTT
TAAATTCTTTTTATTTTGATGTTTTGGCTTTTGCAGCAACAGCAGCAGCAGCAGCAGCAG
AAGCAGCGTCACCGGTGACGCTGTTGATGGTAGATTGGAGGTCCCTGCTTCATTCTTCTT
GAATACTCGTAACACTTTACATGTCATTCCTGGTAAATCTGCTTCGATATAATTTTCCAT
CAATGAAATGACATAATCACCAGAGATTCCTCCATTATATTTATGATTAATATCAATAAG
TTTCCCCCAACCTTGCTTTTGGTGTGGTGTTAATGAAAGCAAATCATATTCTTCCACTTG
ATATTCATTAGTAAATCCACCACGTAAACGGAAATATCNNNNNNNNNNNNNNNNNNNNNN
pan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
pan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>NNNNNNTTCACAAATTGCTAATGTCGACTTCAACACCTTGAGRAAACT
AAATACGAATACTTCGTTTTCGTCAAACCTAACTAACTCAACCACTAAAACTAGCAATGC
TTTATCCAGGCTATTCACTAGAAATAAGTCATCATCTAACATTTCARTTCATCCCTCTTC
AAGCGATGATGATAGCTCACCAAAGACACTCCGAGAATCTACATCTCCATCTGAATCAAG
CAAGAGTGTTAGTGGCAATAAGTTGAGAATTGCCAAAAAGTTGAAGTTTCCCAAGAATCA
AAGCAGTCGGAAACCAGATTTGTTTTTGGATACTAGTAGCACAATAAGCGAAGACAGTTC
TTCGTTTCGGAAAGTAATAACTGGTAATCTGTTAAATGAG

Promoter Sequence
Complementary Strand

Consensus
GGAAAWDHAHDTCCRM: -382 -383 -384 -385 -386 -387 -388 -389 -390 -391 -392 -393 -394 -395 -396 -397 -398 -399 -400 -401 -402 -403 -404 -405 -406 -407 -408 -409 -410 -411 -412 -413 -414 -415 -416 -417 -418 -419 -420 -421 -422 -423 -424 -425 -426 -427 -428 -429 -430 -431 -432 -433 -434 -435 -436 -437 -438 -439 -440 -441 -442 -443 -444 -445 -446 -447 -448 -449 -450 -451 -452 -453 -454 -455 -456 -457 -458 -459 -460 -461 -462 -463 -464 -465 -466 -468

>C4_03990C_B	Upstream Sequence Complementary Strand
TCTAAAGTTAAGATTATCAAAAAATAGGAAAACTAAGAAGAACCGATTAGCAAAGTTAAC
TAAAAAGCTATTACCAGCTATAAGTAGAAGATTTACAAATTAACTACTTCATCATAGTGT
ATTACAACCACATAGAACTTTATTATTACTAAGTACTAGGTTTAGAAGTTTACGTCACAA
ATTTAAGAAAAATAAAACTACAAAACCGAAAACGTCGTTGTCGTCGTCGTCGTCGTCGTC
TTCGTCGCAGTGGCCACTGCGACAACTACCATCTAACCTCCAGGGACGAAGTAAGAAGAA
CTTATGAGCATTGTGAAATGTACAGTAAGGACCATTTAGACGAAGCTATATTAAAAGGTA
GTTACTTTACTGTATTAGTGGTCTCTAAGGAGGTAATATAAATACTAATTATAGTTATTC
AAAGGGGGTTGGAACGAAAACCACACCACAATTACTTTCGTTTAGTATAAGAAGGTGAAC
TATAAGTAATCATTTAGGTGGTGCATTTGCCTTTATAGNNNNNNNNNNNNNN</span>NNNNNNNN
pan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
pan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>NNNNNNAAGTGTTTAACGATTACAGCTGAAGTTGTGGAACTCYTTTGA
TTTATGCTTATGAAGCAAAAGCAGTTTGGATTGATTGAGTTGGTGATTTTGATCGTTACG
AAATAGGTCCGATAAGTGATCTTTATTCAGTAGTAGATTGTAAAGTYAAGTAGGGAGAAG
TTCGCTACTACTATCGAGTGGTTTCTGTGAGGCTCTTAGATGTAGAGGTAGACTTAGTTC
GTTCTCACAATCACCGTTATTCAACTCTTAACGGTTTTTCAACTTCAAAGGGTTCTTAGT
TTCGTCAGCCTTTGGTCTAAACAAAAACCTATGATCATCGTGTTATTCGCTTCTGTCAAG
AAGCAAAGCCTTTCATTATTGACCATTAGACAATTTACTC